Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922165.1_cds_XP_016470958.1_63352
CDS Infomation

[gene=LOC107793183] [db_xref=GeneID:107793183] [protein=H/ACA ribonucleoprotein complex subunit 1-like isoform X2] [protein_id=XP_016470958.1] [location=complement(join(71396..71581,72463..72510,72642..72800,73768..73900,74199..74532,77092..77287))] [gbkey=CDS]
Sequence

ATGGCTACACTAAATCCATTTGACCTATTGGATGATGATGCTGAGGATCCAAGTTTGGAT
GAGTTGAAACTGGCTCAAGCTCAGGCTTCAGCTGTTGGTTCTGTACCTAAGAAAACGGGC
CCAGTTCAGGCCCAAGCTCAGCCCGCTAAGCCTGCTGCTAAGTTGCCTTCCAAACCAGTT
CCACCTTCTCAGGCTGTGAGGGATGCAAGGAGTGACAGCCAGCGTGGAGGAGGACGTGGG
GGTCCACGTGGGGGAGGCCGTGGACGTGCGCCTGGGCGTGGACGTGGGTTTAACCAAGAA
TCTGCTGATGATGAGAATGCTTTTGGCAGTAACAATGGATTCTCTGGGCGGTACAGAGTT
CAAGAAGATGGAGAGTCAGGAAAGCTCTCTGAAAGGAGAGGTGGATATGGCGGACCTCGT
GGGGGGTTCCGTGGAGGTCGTCGTGGTGGTTTCAGTAATGGAGATGCTGCAGAAGGAGAA
GGGGAACGCCCACGGAGAGTGTTTGATCGACGAAGTGGAACTGGCCGTGGAGAGACTGAA
GTGCCTGTTAATGATGGTGAGAAGATTGTCGAGGCTGAGAAAGAAGCTGGACAGGAAGAT
GCTGAAGACACCAATAAGGATTCTACTGCTGCTGAGCCAGAAGAGAAGGAACCTGAGGAG
AAGGAGATGACCCTTGAGGAGTATGAGAAGCTTATGGAAGAGAAGAGGAAGGCGTTGCTG
GCTCTAAAGCCTGAGGAAAGAAAGGTTAATTTGGACAAAGAACTTGAAACCATGCAACTT
CTCTCAAACAAGAAAAATGATGATGAAATCTTCATTAAATTGGGTTCTGAGAAAGAAAAG
AGAAAAGAGGCAGTGGAAAAAGCCAGAAAGACCAAAAGCATAAACGAGTTTCTGAAGCCA
GCAGATGGAGAAAGTAGTTATTATCGCCGTGGTGGTCGTGGCAGGGGACAGGGCCGTGGG
AGAGGTGGTTTTGGTGGTGGTGTTGGTGGAAACAAAAACTTTTCAGCCCCATCTATTGAA
GATGTTGGCCAGTTCCCGTCCTTGGTTGCCAAATGA

Peptide Sequence

PEP ID

XP_016470958.1
PEP Infomation

PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like isoform X2 [Nicotiana tabacum]
Sequence

MATLNPFDLLDDDAEDPSLDELKLAQAQASAVGSVPKKTGPVQAQAQPAKPAAKLPSKPV
PPSQAVRDARSDSQRGGGRGGPRGGGRGRAPGRGRGFNQESADDENAFGSNNGFSGRYRV
QEDGESGKLSERRGGYGGPRGGFRGGRRGGFSNGDAAEGEGERPRRVFDRRSGTGRGETE
VPVNDGEKIVEAEKEAGQEDAEDTNKDSTAAEPEEKEPEEKEMTLEEYEKLMEEKRKALL
ALKPEERKVNLDKELETMQLLSNKKNDDEIFIKLGSEKEKRKEAVEKARKTKSINEFLKP
ADGESSYYRRGGRGRGQGRGRGGFGGGVGGNKNFSAPSIEDVGQFPSLVAK

Transcript Sequence

Gene sequence data has not been registered.